etal/cnvkit

Implement CNV-derived biomarkers such as HRD (LOH/TAI/LST) scores 12 days ago

enhancement help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

Systematic bias associated with insert size 14 days ago

help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

Update included references for hg38 5 months ago

enhancement help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

cnvkit install in Galaxy - no conda env 5 months ago

enhancement help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

import-rna with control sample 5 months ago

help wanted question rna mystery

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

"clonality" command: infer tumor clonal/subclonal fractions 5 months ago

enhancement help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

call: Improve confidence interval, SEM filtering 5 months ago

help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

add '--ploidy-file' option to 'cnvkit.py call' command? 5 months ago

enhancement help wanted

etal/cnvkit

616

Copy number variant detection from targeted DNA sequencing

Python

Open Issues Need Help