aqlaboratory/openfold-3

Add template processing and fetching to the `align-msa-server` command 26 days ago

enhancement good first issue

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Update contributor docs with how to use `pixi` for development 26 days ago

documentation enhancement good first issue

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

[BUG] Flaky test about 1 month ago

bug good first issue contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

[BUG] Docker image error - No module named 'cutlass_library' about 1 month ago

bug good first issue Installation contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Allow residue/component identifier specification for SMILES input. about 1 month ago

enhancement good first issue contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

raw colabfold outputs always deleted even if `cleanup_msa_dir` is disabled about 1 month ago

bug good first issue data preprocessing contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

[BUG] Query IDs with dots in the name is not allowed. 7 months ago

bug good first issue contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Add an option to change the timeout length of Function _preprocess_templates_for_query ? 7 months ago

enhancement good first issue data preprocessing

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

[BUG] Multi-user machine /tmp/of3-directories cause errors 7 months ago

bug good first issue

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Allow to specify the number of the first residue of a chain 11 months ago

enhancement good first issue contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Add description field to input JSON 11 months ago

enhancement good first issue contributions welcome

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Is there a way to provide an installation-default runner_yaml file? 12 months ago

enhancement help wanted Installation

aqlaboratory/openfold-3

878

A fully open source biomolecular structure prediction model based on AlphaFold3

Python

Open Issues Need Help